Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548l in HSCC Head-Neck Chung Cluster 4 Table contains all genes in the HSCC Head-Neck Chung cluster number 4. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548l 901 CCNG2 cyclin G2 [Source:HGNC Symbol;Acc:1593] T 1315 COPB1 coatomer protein complex, subunit beta 1 [Source:HGNC Symbol;Acc:2231] P T 9368 SLC9A3R1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 [Source:HGNC Symbol;Acc:11075] zzz999 9685 CLINT1 clathrin interactor 1 [Source:HGNC Symbol;Acc:23186] P T 5357 PLS1 plastin 1 [Source:HGNC Symbol;Acc:9090] T 2820 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:HGNC Symbol;Acc:4456] T 5783 PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) [Source:HGNC Symbol;Acc:9646] P T 27250 PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) [Source:HGNC Symbol;Acc:8763] zzz999 4258 MGST2 microsomal glutathione S-transferase 2 [Source:HGNC Symbol;Acc:7063] zzz999 1102 RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:HGNC Symbol;Acc:1914] zzz999 79751 SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22 [Source:HGNC Symbol;Acc:19954] zzz999 6814 STXBP3 syntaxin binding protein 3 [Source:HGNC Symbol;Acc:11446] zzz999 6643 SNX2 sorting nexin 2 [Source:HGNC Symbol;Acc:11173] P T 634 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) [Source:HGNC Symbol;Acc:1814] T 22802 CLCA4 chloride channel accessory 4 [Source:HGNC Symbol;Acc:2018] T 1029 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) [Source:HGNC Symbol;Acc:1787] zzz999 3295 HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4 [Source:HGNC Symbol;Acc:5213] zzz999 51727 CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Source:HGNC Symbol;Acc:18170] P T 1048 CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 [Source:HGNC Symbol;Acc:1817] T 1030 CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) [Source:HGNC Symbol;Acc:1788] T 51768 TM7SF3 transmembrane 7 superfamily member 3 [Source:HGNC Symbol;Acc:23049] zzz999 23412 COMMD3 COMM domain containing 3 [Source:HGNC Symbol;Acc:23332] zzz999 5129 CDK18 cyclin-dependent kinase 18 [Source:HGNC Symbol;Acc:8751] zzz999 1562 CYP2C18 cytochrome P450, family 2, subfamily C, polypeptide 18 [Source:HGNC Symbol;Acc:2620] zzz999 26751 SH3YL1 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:29546] T 5868 RAB5A RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783] zzz999 54726 OTUD4 OTU domain containing 4 [Source:HGNC Symbol;Acc:24949] P T 10874 NMU neuromedin U [Source:HGNC Symbol;Acc:7859] zzz999 26234 FBXL5 F-box and leucine-rich repeat protein 5 [Source:HGNC Symbol;Acc:13602] T 3169 FOXA1 forkhead box A1 [Source:HGNC Symbol;Acc:5021] T 3248 HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) [Source:HGNC Symbol;Acc:5154] T 8766 RAB11A RAB11A, member RAS oncogene family [Source:HGNC Symbol;Acc:9760] zzz999 1326 MAP3K8 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:6860] T 9695 EDEM1 ER degradation enhancer, mannosidase alpha-like 1 [Source:HGNC Symbol;Acc:18967] T 5083 PAX9 paired box 9 [Source:HGNC Symbol;Acc:8623] zzz999 54503 ZDHHC13 zinc finger, DHHC-type containing 13 [Source:HGNC Symbol;Acc:18413] zzz999 79956 ERMP1 endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:23703] zzz999 7799 PRDM2 PR domain containing 2, with ZNF domain [Source:HGNC Symbol;Acc:9347] zzz999 1859 DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A [Source:HGNC Symbol;Acc:3091] zzz999 4211 MEIS1 Meis homeobox 1 [Source:HGNC Symbol;Acc:7000] P T 5825 ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 [Source:HGNC Symbol;Acc:67] zzz999 9743 ARHGAP32 Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:17399] zzz999 23443 SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 [Source:HGNC Symbol;Acc:11023] zzz999 6470 SHMT1 serine hydroxymethyltransferase 1 (soluble) [Source:HGNC Symbol;Acc:10850] zzz999 29072 SETD2 SET domain containing 2 [Source:HGNC Symbol;Acc:18420] T 10974 C10orf116 chromosome 10 open reading frame 116 [Source:HGNC Symbol;Acc:24043] zzz999 3280 HES1 hairy and enhancer of split 1, (Drosophila) [Source:HGNC Symbol;Acc:5192] zzz999 1571 CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 [Source:HGNC Symbol;Acc:2631] zzz999 1999 ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:HGNC Symbol;Acc:3318] T 84864 MINA MYC induced nuclear antigen [Source:HGNC Symbol;Acc:19441] zzz999 26959 HBP1 HMG-box transcription factor 1 [Source:HGNC Symbol;Acc:23200] zzz999 4048 LTA4H leukotriene A4 hydrolase [Source:HGNC Symbol;Acc:6710] zzz999 324 APC adenomatous polyposis coli [Source:HGNC Symbol;Acc:583] P T 55187 VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:HGNC Symbol;Acc:23595] zzz999 56267 CCBL2 cysteine conjugate-beta lyase 2 [Source:HGNC Symbol;Acc:33238] zzz999

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